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Development of 19-plex Y STR system and polymorphism studies in Pakistani population
Authors:Faraz Malik  Mahmood A Kayani  M Ansar  Obaid Ullah  Muhammad Shafeeq  Shahid Chohan  Yassir Abbas  Saqib Shazad  Ali Raza  Rahat Rehman  Faizan Raiz  Qurat-ul-ain  Muhammad Hassan Siddiqi  Allah Rakha  Zia ur Rehman  Zahoor Ahmed
Abstract:For the development of 19-plex Y STR system and polymorphism studies in locl ethnic populations sixteen markers of non-recombining regions (NRY) of Y chromosome, which show high power of discrimination among individuals, were selected in this study. Blood samples (600) were e.ollected from the males of three most common castes of Pakistani population (Arnin, Awan and Rajput) with different parent lineages. Three markers (DYS385a/b, DYS389Ⅰ/Ⅱ and YCAⅡa/b) among 16 Y STRs are double-targeted regions of the Y chromosome and thus provide two polymorphie peaks for each respective primer set. These 16 Y-STRs were developed into Megaplex system for simultaneous amplification of all markers within the population. The overall power of discrimination observed in focused populations was 60.5%, 66.5% and 55% in Rajput, Awan and Arain casts respectively. This discrimination power will be helpful in haman identification for forensic casework studies including sexual assaults and paternity testing.
Keywords:STR  Pakistani population  polymorphism  19-plex Y STR
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