Phytoplankton dynamics related to water mass properties in the Gulf of Gabes: Ecological implications

The spatial distribution of chlorophylls and carotenoids was recorded throughout the Gulf of Gabes (South Ionian Sea) in March 2007, and was related to patterns of the physical structure and the nutrient concentrations.Two distinct water masses were identified based on the temperature and salinity (T–S) analysis: a cool and less salty Modified Atlantic Water (MAW) and a saltier Mediterranean Mixed Water (MMW). There was no significant difference in the mean nitrogen and phosphate concentrations between MMW and MAW, although the silica values were significantly higher in MAW. The Integrated chlorophyll a mean value was about 4 mg m^? 2, with a maximum of 13 mg m^? 2 at MAW stations.Higher Chlorophyll a records in typical MAW stations were mainly due to chlorophytes, which contributed up to 58% of the pigments concentrations in the MAW and about 46% in the MMW. The contribution of chlorophytes to total Chlorophyll a was found to be relatively stable throughout the water column. The contribution of diatoms, which were twofold higher in the MMW than in the MAW, did not exceed 17% of chlorophyll a and was mainly due to subsurface maxima. The chlorophytes, pelagophytes, prymnesiophytes and cryptophytes all together accounted for more than 77% of total chlorophyll a in the MAW and about 67% in the MMW.There were statistically significant differences between MMW and MAW in the pigment contribution of cyanobacteria and pelagophytes. These two taxa accounted for 13% and 24% of chlorophyll a respectively in the MAW and MMW indicating that these differences concerned phytoplankton classes at relatively low contributions to total chlorophyll a.     

Effect of mixing on microbial communities in the Rhone River plume

The biological processes involved during mixing of a river plume with the marine underlying water were studied off the Rhone River outlet. Samples of suspended and dissolved matter were collected while tracking a drifting buoy. Three trajectories were performed, at 2-day intervals, under different hydrological and meteorological situations. A biological uptake was evidenced from ammonium (NH₄) and phosphate (PO₄) shortage, indicating an early “NH₄-dependent” functioning occurring before the well-known “NO₃-based” cycle. The different ratios between NH₄, NO₃ and PO₄, as a function of salinity, were discussed to detail the preferential use in PO₄ and NH₄. Salinity zones with enhanced bacterial production, high chlorophyll a concentration, as well as DOC, NH₄ and PO₄ consumption were evidenced from 20 to 35 in salinity. It was shown that the successive abundance of bacteria and phytoplankton during transfer reflected the competition for PO₄ of both communities. On the Rhone River plume, the role played by temperature, light conditions and suspended matter upon biological activity seems relatively minor compared to salinity distribution and its related parameter: nutrient availability. It can be concluded that biological uptake in the Rhone River plume was closely related to the dilution mechanism, controlled itself by the dynamics of the plume. In windless conditions and close to the river mouth, the density gradient between marine and river water induced limited exchanges between the nutrient-rich freshwater and the potential consumers in the underlying marine water. Consequently, little biological activity is observed close to the river mouth. Offshore, mixing is enhanced and a balance is reached between salinity tolerance and nutrient availability to form a favourable zone for marine phytoplankton development. This can be quite far from the river mouth in case of a widely spread plume, corresponding to high river discharge. Under windy and wavy conditions, the plume freshwater is early and rapidly mixed, so that the extension of the “enhanced production zone” is drastically reduced and even bacteria could not benefit from the fast mixing regime induced.     

Vertical profiles of particulate organic matter and its relationship with chlorophyll-a in the upper layer of the NE Mediterranean Sea

Particulate organic matter (POM), nutrients, chlorophyll-a (CHL) and primary production measurements were performed in the upper layer of three different regions (cyclonic, anticyclonic and frontal+peripherial) of the NE Mediterranean Sea in 1991–1994. Depth profiles of bulk POM exhibited a subsurface maximum, coinciding with the deep chlorophyll maximum (DCM) established near the base of the euphotic zone of the Rhodes cyclone and its periphery, where the nutricline was situated just below the euphotic zone for most of the year. Moreover, the POM peaks were broader and situated at shallower depths in late winter–early spring as compared to its position in the summer–autumn period. Under prolonged winter conditions, as experienced in March 1992, the characteristic POM feature disappeared in the center of the Rhodes cyclone, where the upper layer was entirely occupied by nutrient-rich Levantine deep water. Deep convective processes in the cyclonic gyre led to the formation of vertically uniform POM profiles with low concentrations of particulate organic carbon (POC) (2.1 μM), nitrogen (0.21 μM), total particulate phosphorus (PP) (0.02 μM) and chlorophyll-a (0.5 μg/L) in the euphotic zone. Though the Levantine deep waters ascended up to the surface layer with the nitrate/phosphate molar ratios (28–29) in March 1992, the N/P molar ratio of bulk POM in the upper layer was low as 10–12, indicating luxury consumption of phosphate during algal production. Depth-integrated primary production in the euphotic zone ranged from 38.5 for oligotrophic autumn to 457 mg C m⁻² day⁻¹ for moderately mesotrophic cool winter conditions.     

Variability of mesozooplankton spatial distribution in the North Aegean Sea, as influenced by the Black Sea waters outflow

The North Aegean Sea constitutes an important region of the Mediterranean Sea since in its eastern part the mesotrophic, low salinity and relatively cold water from the Black Sea (outflowing from the Dardanelles strait) meets the oligotrophic, warm and very saline water of Levantine origin, thus forming a thermohaline front. Mesozooplankton samples were collected at discrete layers according to the hydrology of the upper 100 m, during May 1997 and September 1998. In May highest biomass and abundance values (up to 66.82 mg m^− 3 and 14,157 ind m^− 3) were detected in the 10–20 m layer (within the halocline) of the stations positioned close to the Dardanelles strait. The front moved slightly southwards in September, characterized by high biomass and abundance values within the halocline layer. The areas moderately or non influenced by Black Sea water revealed lower standing stock values than the frontal area in both cruises and maxima were detected in the uppermost low salinity layer. Samples collected at the stations and/or layers more influenced by Black Sea water were distinguished from those collected at layers and/or stations more affected by Levantine waters in both periods. In May the former samples were characterized by the copepods Acartia clausi, Centropages typicus, Paracalanus parvus. The abundance of the above species decreased gradually with increasing salinity, in the horizontal and/or in the vertical dimension, with a parallel increase of the copepods Oithona plumifera, Oithona copepodites, Oncaea media, Ctenocalanus vanus, Farranula rostrata. During September the frontal area as well as that covered by the modified Black Sea water, were highly dominated by the cladoceran Penilia avirostris and doliolids. For both seasons, MDS plots, issued from the combination of mesozooplankton and water-type data, revealed the gradual differentiation of zooplankton composition from the frontal area towards the area covered by Levantine water, following the spreading and mixing of the Black sea water. The observed temporal and spatial variability in the distribution pattern of mesozooplankton standing stock and species composition seems to depend considerably on the variability of circulation and frontal flows.     

Seasonal variability of dissolved major and trace elements in the Gaoping (Kaoping) River Estuary, Southwestern Taiwan

To gain a better understanding of the geochemical behavior of trace elements in estuary and to examine seasonal variations in associated chemical fluxes, more than 50 water samples were collected near the mouth of the Gaoping (formerly spelled Kaoping) River, a major river in southwestern Taiwan. These samples, collected in typical dry and wet tropical monsoon seasons during 1999–2004, were analyzed for dissolved major and trace elements and Sr isotopes. Our results show that dissolved Na, Mg, Ca and Cl behave conservatively along the salinity gradient and display significantly larger fluxes in the wet seasons. Vertical profiles of the major elements reveal mainly two end-member mixing between the riverine freshwater and the seawater. Trace elements of B, Sr and U also display conservative distribution in the vertical profiles. In contrast, dissolved Ba and Mn were affected by uptake/release processes involving groundwater, benthic flux and water/sediment interactions. ⁸⁷Sr/⁸⁶Sr ratios also support a scenario of mixing between a more radiogenic continental source and the seawater. It appears that the wet season samples have higher trace element concentrations due to inputs from topsoils and atmospheric dusts. This implies that chemical compositions in river waters respond sensitively to regional climatic changes. The observed high fluxes of B and Sr in the Gaoping (Kaoping) River emphasize the potential impact of mountainous rivers on the global oceanic mass balance of these constituents.     

Size-fractionated phytoplankton biomass and species composition in the Indian sector of the Southern Ocean during austral summer

During the late austral summer of 1994, Antarctic waters were characterized by low phytoplankton biomass. Along the 62°E meridian transect, between 49°S and 67°S, chlorophyll (Chl.) a concentration in the upper 150 m was on average 0.2 mg m⁻³. However, in the Seasonal Ice Zone (SIZ) chlorophyll a concentrations were higher, with a characteristic deep chlorophyll maximum. The highest value (0.6 mg Chl. a m⁻³) was measured at the Antarctic Divergence, 64°S, corresponding to the depth of the temperature minimum (100 m). This deep biomass maximum decreased from South to North, disappeared in the Permanently Open Ocean Zone (POOZ) and reappeared with less vigour in the vicinity of the Polar Front Zone (PFZ). In the SIZ, the upper mixed layer was shallow, biomass was higher and the >10 μm fraction was predominant. In this zone the >10 μm, 2–10 μm and <2 μm size fractions represented on the average 46%, 25.1% and 28.9% of the total integrated Chl. a stock in the upper 100 m, respectively. The phytoplankton assemblage was diverse, mainly composed of large diatoms and dinoflagellate cells which contributed 42.7% and 33.1% of the autotrophic carbon biomass, respectively. Moving northwards, in parallel with the decrease in biomass, the biomass of autotrophic pico- and nanoflagellates (mainly Cryptophytes) increased steadily. In the POOZ, the picoplanktonic size fraction contributed 47.4% of the total integrated Chl. a stock. A phytoplankton community structure with low biomass and picoplankton-dominated assemblage in the POOZ contrasted with the relatively rich, diverse and diatom-dominated assemblage in the SIZ. These differences reflect the spatial and temporal variations prevailing in the Southern Ocean pelagic ecosystem.     

Steady-state single cell model simulations of photoacclimation in a vertically mixed layer: implications for biological tracer studies and primary productivity

A numerical single-cell photoacclimation–diffusion model was constructed and used to develop criteria regarding the use of individual phytoplankton cells as tracers for vertical mixing and to illustrate how rates of vertical mixing might affect phytoplankton physiology. Both first-order and logistic representations of photoacclimation kinetics were used. Steady state was assumed for simplicity and to provide a starting point for further investigations. The modeled variance and higher moments (within a phytoplankton population) of a generic photoacclimative parameter all show trends, which are diagnostic of mixing rates and/or boundary effects. This allowed the establishment of criteria by which frequency distributions of phytoplankton physiological properties (e.g., cell fluorescence) might be used as indicators of vertical mixing. The same model can be used to predict the effects of vertical mixing on phytoplankton productivity and growth. Application of the model to both photosynthesis and carbon to chlorophyll ratios suggested that a combination of vertical mixing and hysteresis (as represented in the logistic model of photoacclimation) in acclimation kinetics can enhance specific growth rates of phytoplankton. This enhanced growth occurred as a result of mixing-induced variation in carbon to chlorophyll ratios and is in contrast to chlorophyll-specific productivity, which was maximal at low mixing rates. Differential rates of photoacclimation to upward vs. downward shifts in irradiance, may enable phytoplankton cells to better survive in a turbulent environment.     

A study of the response of chlorophyll-a biomass to a winter upwelling event off Western Iberia using SeaWiFS and in situ data

Observations of a winter upwelling event off Western Iberia shelf/slope in the area of influence of the Western Iberia Buoyant Plume (WIBP) were conducted in February 2000. Spatial patterns and time evolution of the chlorophyll-a (chl-a) biomass are analysed, based on in situ and satellite data. SeaWiFS-derived chl-a concentration L2 products were used to track the chlorophyll front and estimate its westward migration velocity (maximum up to 29 km day⁻¹), as well as to characterize the frontal system and its evolution. A method associating the type of spectral signature of a pixel to the fraction of chlorophyll probed by SeaWiFS enabled the estimation of the chl-a biomass within error intervals. High chlorophyll concentrations (for wintertime) were observed over the shelf and slope, up to large distances to the coast. Due to the WIBP, a shallow Ekman layer developed, being nearly coincident with the stratified upper meters. The transport comprised westward advection and stretching of the plume, with little entrainment with the offshore deep mixed layer waters. The relative enlargement of the total area of the Inside-Front Zone (IFZ) during the upwelling event was roughly accompanied by the maintenance of the average biomass per unit of area, considering the water column up to depths of interest. This suggests that there was a net increase of chl-a biomass inside the water column associated with the IFZ, roughly proportional to the increase in the IFZ area. Retention of phytoplankton in the shallow stratified nutrient-rich waters of the WIBP was a key factor for this increase in chl-a biomass.     

Air–sea gas exchange at extreme wind speeds measured by autonomous oceanographic floats

Measurements of the air–sea fluxes of N₂ and O₂ were made in winds of 15–57 m s^− 1 beneath Hurricane Frances using two types of air-deployed neutrally buoyant and profiling underwater floats. Two “Lagrangian floats” measured O₂ and total gas tension (GT) in pre-storm and post-storm profiles and in the actively turbulent mixed layer during the storm. A single “EM-APEX float” profiled continuously from 30 to 200 m before, during and after the storm. All floats measured temperature and salinity. N₂ concentrations were computed from GT and O₂ after correcting for instrumental effects. Gas fluxes were computed by three methods. First, a one-dimensional mixed layer budget diagnosed the changes in mixed layer concentrations given the pre-storm profile and a time varying mixed layer depth. This model was calibrated using temperature and salinity data. The difference between the predicted mixed layer concentrations of O₂ and N₂ and those measured was attributed to air–sea gas fluxes F_BO and F_BN. Second, the covariance flux F_CO(z) = wO₂′(z) was computed, where w is the vertical motion of the water-following Lagrangian floats, O₂′ is a high-pass filtered O₂ concentration and (z) is an average over covariance pairs as a function of depth. The profile F_CO(z) was extrapolated to the surface to yield the surface O₂ flux F_CO(0). Third, a deficit of O₂ was found in the upper few meters of the ocean at the height of the storm. A flux F_SO, moving O₂ out of the ocean, was calculated by dividing this deficit by the residence time of the water in this layer, inferred from the Lagrangian floats. The three methods gave generally consistent results. At the highest winds, gas transfer is dominated by bubbles created by surface wave breaking, injected into the ocean by large-scale turbulent eddies and dissolving near 10-m depth. This conclusion is supported by observations of fluxes into the ocean despite its supersaturation; by the molar flux ratio F_BO/F_BN, which is closer to that of air rather than that appropriate for Schmidt number scaling; by O₂ increases at about 10-m depth along the water trajectories accompanied by a reduction in void fraction as measured by conductivity; and from the profile of F_CO(z), which peaks near 10 m instead of at the surface.At the highest winds O₂ and N₂ are injected into the ocean by bubbles dissolving at depth. This, plus entrainment of gas-rich water from below, supersaturates the mixed layer causing gas to flux out of the near-surface ocean. A net influx of gas results from the balance of these two competing processes. At lower speeds, the total gas fluxes, F_BO, F_BN and F_CO(0), are out of the ocean and downgradient.     

Cross-shelf circulation and phytoplankton distribution at the summertime New England shelfbreak front

We investigate aspects of the secondary (cross-shelf) circulation at the Middle Atlantic Bight shelfbreak front using high-resolution data collected on the New England Shelf in August 2002. The alongshore shelfbreak jet coincides with the front at the seaward edge of the cold pool (remnant winter shelf water) and there is a suggestion of a cross-stream convergence centered at the jet core. Despite indications of convergence we found no evidence of a surface subduction on the seaward side of the front. At depth 70 m near the shelfbreak there was a patch of chlorophyll, located within a local temperature–salinity maximum which, though significantly below the euphotic zone, appeared to be photo-acclimated and viable. The chlorophyll feature could be the result of a local subduction by a larger scale eddy circulation seaward of the front.Dye tracer experiments directly observed the convergence at the foot of the shelfbreak front and subsequent upwelling of bottom boundary layer water along the shoreward side of the shelfbreak front. But, we found no evidence that this upwelling influenced productivity at the front. Further, since there was no cross-shelf maximum in subsurface chlorophyll at the front, we conclude that this productivity is in general, sustained by a broadly distributed local vertical nutrient flux from an underlying nutrient reservoir.     

Pigments, size and distribution of Synechococcus spp. in the Black Sea

Pigments, size and distribution of Phycoerythrin-containing unicellular cyanobacteria Synechococcus spp. within the euphotic zone were studied for the first time in April–May 1994 in the western and southwestern Black Sea by epifluorescence microscopy and flow-cytometry. Synechococcus was present in varying quantities at every station and depth studied. Surface spatial distribution of Synechococcus revealed that cells were much more abundant in offshore waters than near coastal regions under the direct influence of the Danube river. Minimum and maximum cell concentrations ranged between 9×10² and 1.45×10⁵ cells/ml at the surface, between 2×10³ and 1.23×10⁵ cells/ml at the chlorophyll sub-maximum layer, and between 1.3×10² and 3.5×10² at the nitrite maximum layer. Cells at the chlorophyll sub-maximum layer (based on in-situ fluorometer readings) fluoresce brighter and longer than the ones at the surface and lower depths. Spectral properties of chromophore pigment types of total 64 clonal isolates from different depths down to the lower layer of the euphotic zone (60 m) in the southern Black Sea coast revealed that all have type 2 phycoerythrobilin in common, lacking in phycourobilin. In vivo fluorescence emission maxima for the phycoerythrobilin were about the same (578 nm) for all isolates. All isolates examined showed in vivo absorption maxima at between 435 and 442 nm and at about 681 nm due to chlorophyll-a. Based on the flow cytometer mean forward light scatter data for size distribution, it could be concluded that cells at the surface mixed layer (0–10 m) were larger in cell size than the cells at lower depths (20–60 m).     

Surface chlorophyll in the Black Sea over 1978–1986 derived from satellite and in situ data

Absolute values of chlorophyll a concentration and its spatial and seasonal variations in the Black Sea were assessed by using satellite CZCS and in situ data. Since the satellite CZCS had operated for the 1978–1986 period, CZCS data was used for assessing the past state of the Black Sea just before the onset of drastic changes observed in late 1980s. The approach used for the calculation of the absolute values of chlorophyll a concentration from CZCS data was based on the direct comparison of in situ chlorophyll a data and those of CZCS and by applying the algorithm developed for the transformation of CZCS data into chlorophyll a values. CZCS Level 2 data related with pigment concentration having a spatial resolution of 1 km at nadir were used. The daily Level 3 files were derived by binning Level 2 values into 4-km grid cells and the monthly and seasonal Level 3 files were created by averaging the daily Level 3 files over the corresponding period. In situ chlorophyll a data were obtained by spectrophotometric and fluorometric methods in 15 scientific cruises over the 1978–1986 period. Total number of ship-measured data used for the comparison with those CZCS values was 590.Chlorophyll a concentration (Chl) was derived from CZCS values (C) with regression equations Chl=kC; the coefficient of transformation k was calculated from six different data sets by taking into account distinctions between subregions and seasons. The reasons for difference in the k values have been analyzed.Statistical comparison of the chlorophyll a values measured in situ and those derived from CZCS data was based on log-transformed data and gave the following results: regression SLOPE=0.842, regression INTERCEPT=−0.081, coefficient of determination (R²)=0.806, root–mean–square ERROR=0.195. The mean monthly chlorophyll a distributions derived from CZCS data over 1978–1986 have been constructed and the mean seasonal chlorophyll a values in different regions have been calculated and analyzed. The significant difference in chlorophyll concentration between the western shelf regions and the open part of the Black Sea has been demonstrated, especially in warm season. At almost all seasons, the highest chlorophyll concentration is observed in the western interior shelf region which is under strong influence of Danube. The summer mean chlorophyll concentration in this region is 18 times higher than that in the open parts and about nine times higher than in the eastern shelf region. The greatest seasonal variations are observed in the open part of the Black Sea: chlorophyll concentration in cold season is four to six times higher than in summer and three to five times higher than in April and October. To the contrary, in the western interior shelf regions, the concentration is higher in May–October (about twice than that in November–March). Seasonal variations in the western outer shelf regions are smoothed out as compared with both the western interior shelf and the open regions.     

Improving the physics of a coupled physical–biogeochemical model of the North Atlantic through data assimilation: Impact on the ecosystem

Several studies on coupled physical–biogeochemical models have shown that major deficiencies in the biogeochemical fields arise from the deficiencies in the physical flow fields. This paper examines the improvement of the physics through data assimilation, and the subsequent impact on the ecosystem response in a coupled model of the North Atlantic. Sea surface temperature and sea surface height data are assimilated with a sequential method based on the SEEK filter adapted to the coupling needs. The model domain covers the Atlantic from 20°S to 70°N at eddy-permitting resolution. The biogeochemical model is a NPZD-DOM model based on the P3ZD formulation. The results of an annual assimilated simulation are compared with an annual free simulation.With assimilation, the representation of the mixed layer depth is significantly improved in mid latitudes, even though the mixed layer depth is generally overestimated compared to the observations. The representation of the mean and variance of the currents is also significantly improved.The nutrient input in the euphotic zone is used to assess the data assimilation impact on the ecosystem. Data assimilation results in a 50% reduction of the input due to vertical mixing in mid-latitudes, and in a four- to six-fold increase of the advective fluxes in mid-latitudes and subtropics. Averaged zonally, the net impact is a threefold increase for the subtropical gyre, and a moderate (20–30%) decrease at mid and high latitudes.Surface chlorophyll concentration increases along the subtropical gyre borders, but little changes are detected at mid and high latitudes. An increase of the primary production appears along the Gulf Stream path, but it represents only 12% on average for mid and high latitudes. In the subtropical gyre centre, primary production is augmented but stays underestimated (20% of observations). These experiments show the benefits of physical data assimilation in coupled physical–biogeochemical applications.     

A two-layer model of the Rhine plume

The outflow of Rhine water into the shallow Southern Bight of the North Sea leads to almost discontinuous vertical density distributions and sharp frontal structures around the river mouth. Strong tidal motion, wind and baroclinic effects have large influence on the dynamics and dispersion of river water. A three-dimensional tidal model, including advective and diffusive transport of salinity, is used in the two-layer mode for simulation of Rhine water outflow to quantify the interaction of the different processes and the effect on dispersion and mixing of river water. Layer depths are adjusted in a way that no advective transports between upper and lower layer take place in case of sufficiently stable stratification. In case of weak or no stratification the upper layer depth is fixed, and advective transports between layers are computed. Model results show frontal eddy development and (limited) growing internal waves due to baroclinic instability. Comparisons with observational data are presented.     

Large-scale physical controls on phytoplankton growth in the Irminger Sea Part I: Hydrographic zones, mixing and stratification

Hydrographic surveys in three consecutive seasons in the Irminger Sea in 2001/2002 have revealed six physical regimes (zones) in which different surface mixing and spring re-stratification processes dominate. They are the South Irminger Current, the North Irminger Current, the Central Irminger Sea, the Polar-origin East Greenland Current, the Atlantic-origin East Greenland Current and the Reykjanes Ridge. The variations in restratification processes in particular have significant implications for the timing of shallow spring mixed layer development and therefore the timing and strength of the spring bloom. The relative roles of heat and freshwater in controlling re-stratification are examined for each hydrographic zone, and it is shown that the simplest concept of solar warming generating spring stratification is appropriate for the Irminger Current and the central Irminger Sea. However in the East Greenland Current and the Reykjanes Ridge zones, the springtime arrival of fresh or saline water at the surface dominates re-stratification and generates the earliest and strongest spring blooms of the region. In the cool fresh centre of the Irminger Sea the relatively low chlorophyll-a throughout the year cannot be wholly explained by stratification or nutrient concentrations. Details of the annual cycle in temperature, salinity, chlorophyll-a and nutrients are presented for each hydrographic zone.     

Mesozooplankton species distribution in the NW and N Iberian shelf during spring 2004: Relationship with frontal structures

We have analysed the mesozooplankton community structure in the southern Bay of Biscay shelf and its relationship with the hydrographic conditions during spring 2004. According to thermohaline characteristics, we observed two frontal zones of distinct origin along the shelf (around 7° and 3°W), that allowed us to differentiate three different hydrographic domains. The westernmost part of the shelf (WC), defined by the presence of relatively warm and salty water related to the presence of the Iberian Poleward Current (IPC), the easternmost region (EC), characterized by colder and fresher water and subject to the influence of freshwater inputs from the Adour river in the French coast, and a region in the Central Cantabrian Sea (CC), where thermohaline characteristics were intermediate between these two extremes. The mixing layer depth (MLD) regime in these areas was also different: the WC region was characterized by a mixed water column, whereas in the EC region the river discharges produces stratification of the upper meters of the water column (< 10 m); in the CC region, we found a distinct vertical mixing regime that separated coastal (stratification) from shelf (mixed water column) stations, giving rise to a notorious across-shelf front. We found a good match between the aforesaid hydrographic regions and the distribution of mesozooplankton species composition and community assemblages: the Mantel correlation between physical variables and mesozooplankton distribution was highly significant (n = 63, r = 0.70, α < 0.001). In the WC region, the community was dominated by Paracalanus parvus, Oithona helgolandica, Acartia clausi and Clausocalanus pergens, while in the EC region the most dominant species were Noctiluca scintillans, Oncaea media and Temora longicornis. The CC region showed similar composition of copepods than the WC region, but larvaceans (Oikopleura spp. and Fritillaria spp.) were more abundant in the CC region than in the WC region. Within each zone, the relative abundances of the dominant species differed between coastal and shelf locations.     

Mixing over the steep side of the Cycladic Plateau in the Aegean Sea

Intensive microstructure sampling over the southern slope of the Cycladic Plateau found very weak mixing in the pycnocline, centered on a thin minimum of diapycnal diffusivity with Kρ=1.5×¹⁰−6 m² s^− 1. Below the pycnocline, Kρ increased exponentially in the bottom 200 m, reaching 1 × 10^− 4 m² s^− 1 a few meters above the bottom. Near-bottom mixing was most intense where the bottom slope equaled the characteristic slope of the semi-diurnal internal tide. This suggests internal wave scattering and/or generation at the bottom, a conclusion supported by near-bottom dissipation rates increasing following rising winds and with intensifying internal waves. Several pinnacles on the slope were local mixing hotspots. Signatures included a vertical line of strong mixing in a pinnacle's wake, an hydraulic jump or lee wave over a downstream side of the summit, and a ‘beam’ sloping upward at the near-inertial characteristic slope. Because dissipation rate averages were dominated by strong turbulence, ?/νN² > 100, the effect on Kρ of alternate mixing efficiencies proposed for this range of turbulent intensity is explored.     

Autumn net copepod abundance and assemblages in relation to water masses on the continental shelf of the Yellow Sea and East China Sea

Copepod species diversity, abundance and assemblages in relation to water masses over the continental shelf of the Yellow Sea (YS) and East China Sea (ECS) were studied extensively based on the net plankton samples in autumn 2000. Multivariate analysis based on copepod assemblage resulted in recognition of five groups (Groups 1−5) corresponding to the water masses. Groups 1 and 2 delineated from inshore stations with low salinity YS Surface Water, and offshore stations with YS Cold Water in the YS. Group 3 located in the joint area of YS and ECS mainly with Mixed Water. Groups 4 and 5 in the ECS delineated two assemblages mainly from inshore and shallow stations with ECS Mixed Water in the southeastern ECS, and offshore stations along the ECS shelf edge controlled by saline Kuroshio Water. Salinity and temperature were more important in characterizing copepod assemblage of the continental shelf than chlorophyll a.     

The vernal bloom in heterogeneous convection: a numerical study of Baltic restratification

The onset of the vernal phytoplankton bloom in heterogeneous convection at a temperature below the temperature of maximum density (θ_ρ) is studied by means of an idealized numerical model. The modeled setting resembles the well-documented conditions in the Baltic Sea. For the low sea surface temperature found in early spring, the convection in this inland sea is driven by surface heating, in marked contrast to oceanic conditions, where cooling serves the purpose. The heterogeneity of the physical environment is enhanced by a lateral freshwater flux, which stratifies parts of the domain and allows the surface to warm above θ_ρ in the stratified areas. Consequently, the same surface heat flux may cause convection in some parts and stabilisation in other parts of the domain. The development of a layer of anomalously cold water with θ<θ_ρ is demonstrated numerically.The physical heterogeneity is strongly reflected in the development of the vernal bloom, with significant phytoplankton growth possible only in the stratified areas. The non-local organised structures in the mixing layer play a dominant role in the development of the bloom. An analysis of the model results shows the presence of biological intrusions during the bloom, highly reminiscent of their atmospheric counterparts.     

Water masses and cyclonic circulation in Bay of La Paz, Gulf of California, during June 1998

The Bay of La Paz, a coastal and shallow basin of the Gulf of California (depth<420 m), exchanges mixed-layer waters with the Gulf of California predominantly through Boca Grande (Big Mouth), in the northeastern part of the bay. Equatorial Surface Water (ESW) flows from the gulf to the bay; once there, due to evaporation processes, this water increases its salinity above 35.00, therefore becoming Gulf of California Water (GCW) Mass. During June 1998, the baroclinic circulation in the bay was dominated by a cyclonic gyre. The hydrographic dome, related to this gyre, is depicted until approximately 150-m depth. However, the vertical mixing of water between the mixed-layer and the ones below practically does not occur because of the development of a sharp pycnocline. This fact and the isolation of the bottom of the bay by a bathymetric sill (approximately 250-m depth) at Boca Grande induce low oxygen content, particularly in the bottom-waters (O₂<0.1 ml/l). Chlorophyll values are higher and with larger vertical fluctuations within the Bay of La Paz than outside.