西北地区汉族HLA-A,B基因座单元型分析

目的　调查分析西北地区汉族人群中HLA A ,B基因座单元型频率。方法　采用PCR SSO反向斑点杂交技术对 87个家系 2 76名西北地区汉族个体HLA A ,B基因座进行检查 ,通过HLA以单元型遗传方式遗传的规律归结出单元型。结果　居单元型频率前三位的是A0 2 B4 6、A30 B13、A0 2 B4 0 ;具有明显连锁不平衡的单元型 11种。结论　西北地区汉族人群中HLA A ,B基因座单元型频率与国内其他地区汉族人群相比有其自身特点 ,A30 B13、A0 1 B37、A32 B4 4具有显著的连锁不平衡性     

中国新疆哈萨克族人群CSF1PO、TH01和TPOX三个STR位点的遗传多态性

目的　获得CSF1P0、TPOX和TH0 1三个短串联重复序列 (shorttandemrepeat ,STR)在新疆哈萨克族人群中等位基因频率、基因型频率及相关法医学数据。方法　应用PCR技术、4 0 g·L-1(4% )变性聚丙烯酰胺凝胶电泳及银染技术对上述三个STR位点分型。结果　新疆哈萨克族人群CSF1P0位点有 8个等位片段 ,TPOX位点有 8个等位片段 ,TH0 1位点有 7个等位片段 ;3个位点的基因型分布均符合Hardy Weinberg平衡 ;各位点杂合度分别为 0 .875 3、0 .8777、0 .932 1,多态信息量分别为 0 .74 0 1、0 .75 6 8、0 .75 0 9。结论　得到的上述三个位点的基因频率数据可为新疆哈萨克人群遗传学研究和法医学应用提供依据     

HLA-I类基因多态性与白血病易感性的关联性研究

目的探讨白血病易感性与HLA-I类基因多态性之间的关联性,寻找白血病的易感基因。方法采用序列特异性寡核苷酸探针杂交技术(PCR-SSO)对65例白血病患者和48例正常对照组健康者进行HLA-A、B基因分型。结果在等位基因HLA-A、B中,白血病患者的HLA-A01、B38基因的基因频率高于正常对照组(P<0.05),而HLA-A11基因的基因频率明显下降(P<0.05)。结论基因A01、B38对白血病有遗传易感作用,而基因A11对白血病有遗传拮抗作用。     

HLA-DRB1基因多态性与克山病核心家系的关联和连锁分析

目的　探讨克山病与HLA DRB1基因的遗传关系。方法　采用基于单体型相对风险 (HHRR)和传递不平衡检验 (TDT)的方法 ,在 18个克山病患者及 36个双亲中进行DRB1基因多态性的关联和连锁分析。结果　经HHRR和TDT分析 ,克山病患者与DRB1位点DR15相关联和连锁 (χ2 分别为 7.4 0和 12 .2 5 ,P <0 .0 1)。结论　克山病与HLA DRB1 15基因相关联和连锁     

GENETIC POLYMORPHISM OF SIX Y CHROMOSOMAL STR IN CHINESE HUI ETHNIC GROUP

Objective To study genetic polymorphism of 6 Y chromosomal STR in Hui ethnic group living in Ningxia Hui ethnic autonomous region, in order to evaluate their usefulness in forensic science and enrich the Chinese genetic information resources. Methods We investigated 101 unrelated, healthy, male individuals of Hui ethnic group and studied their allelic frequency distribution and haplotype diversity of 6 Y chromosomal STR. Primer for each loci was labeled with the fluorescent by FAM (blue) or TAMRA(yellow). The data of Hui ethnic group were generated coamplification, GeneScan, genotype, and genetic distribution analysis. Results 31 alleles and 43 phenotype(DYS385) were detected, with the frequencies ranging from 0. 0099- 0. 7129. Out of a total of 101 individuals, 96 showed different haplotypes; 91 were unique; 5 were found 2 times. The haplotype diversity for 6 Y-STR loci was 0. 9990. Conclusion The date obtained can be valuable for individual identification, paternity testing in forensic fields and for population genetics because of 6 Y-STR loci high polymorphism.     

REPORT OF HLA DISTRIBUTION IN 2315 VOLUNTEER DONORS OF CHINESE BONE MARROW BANK FROM NORTHWEST CHINA

HumanLeukocyteAntigen(HLA)system, knownashumanmajorhistocompatibilitycomplex (MHC),playsakeyroleinantigenprocessing,im muneregulationandotheraspects.HLAisalsobeen calledastransplantingantigenasaccuratetypingof HLAonbothpatientanddonorcanincreasedramat i…     

中国西北地区汉族人群5-羟色胺2A受体启动区多态性与心境障碍发病、性别、症状、自杀的相关性

目的探讨中国西北地区汉族人群5-羟色胺2A受体(-1438A/G)基因多态性与心境障碍的发病、性别、亚型以及自杀相关是否关联。方法应用聚合酶链反应(PCR)扩增技术测定160例患者(包括单相抑郁症和双相障碍-抑郁相)和160例正常对照的5-HTR2A的基因型和等位基因,分别验证各种基因型与心境障碍的性别、亚型、自杀的相关性。结果病例组的A/G、G/G基因型和G等位基因频数均高于正常对照组(47.5%vs.40.6%;38.7%vs.34.4%;62.5%vs.54.7%;均P<0.05),两组性别分层比较,女性组与男性病例组相比差异无统计学意义(P>0.05)。单相抑郁症与双相障碍-抑郁相两组间进行比较差异无统计学意义(P>0.05)。病例组有无自杀相关分层比较差异无统计学意义(P>0.05)。自杀相关性别分层比较差异无统计学意义(P>0.05)。结论中国西北地区汉族人群5-HTR2A(-1438A/G)基因多态性与心境障碍的发病相关,主要是与单相抑郁症相关;A/G、G/G基因型可能是心境障碍的易感基因型,G等位基因可能是心境障碍的易感基因。     

HLA与扩张型心肌病的关联研究

用微量淋巴细胞毒试验检测了20例扩张型心肌病患者的HLA—A、B抗原,并检测了北方汉族无血缘关系的健康人103例作对照。结果发现RR在3以上者有HLA-A28、A31及HLA—B27,但经Fisher确切P值及校正P值处理后,无显著性差异。故未发现与扩张型心肌病有关联的HLA抗原。     

甘肃裕固族9个STR基因座遗传多态性研究

目的　研究中国甘肃裕固族STR遗传结构。方法　选择 9个STR基因座 (D3S135 8,VWA ,FGA ,TH0 1,TPOX ,CSF1PO ,D5S818,D13S317,D7S82 0 ) ,采用STR复合扩增及荧光标记STR基因扫描技术 ,同时检测 12 0个裕固族健康无关个体血液样本。结果　 9个STR基因位点共检出 6 5个等位基因 ,基因频率分布在 0 .0 0 5 7～0 .5 795 ;基因型共有 178种 ,频率分布在 0 .0 114～ 0 .30 6 8之间 ;9个STR位点基因型分布均符合Hardy Weinberg平衡定律 (P >0 .0 5 ) ;9个STR位点多态信息量 (PIC)均大于 0 .6 0 5 4 ,杂合度 (H)均大于 0 .6 15 8,个体识别力 (DP)均大于 0 .82 2 6 ,非父排除率 (EPP)均大于 0 .5 0 17。结论　获得了中国甘肃裕固族 9个STR基因座的遗传多态性数据 ,丰富了中华民族基因数据库 ,在人类群体遗传学及法医学研究领域有重要应用价值。     

5-羟色胺转运体基因多态性和抑郁症的发病、性别、严重程度及自杀行为的相关性

目的探讨中国汉族人群5-羟色胺转运体启动区(5-HTTLPR)基因多态性和抑郁症的发病、性别、严重程度及自杀是否相关。方法应用聚合酶链式反应(PCR)扩增技术测定150例抑郁症患者和150例正常对照者的5-HT-TLPR基因型和等位基因,分别验证各种基因型与中、重度抑郁症发病、性别及自杀行为的相关性。结果病例组SS、LS基因型及S等位基因频率均高于对照组(26.0% vs.20.0%;52.7% vs.46.0%;52.3% vs.43.0%;P均<0.05);两组性别分层比较,女性S等位基因频率高于对照组(55.3% vs.43.6%,P<0.05);病例组严重程度分层比较差异无统计学意义(P>0.05);病例组有无自杀行为分层比较,有自杀行为患者SS基因型频率(37.3% vs.20.2%)及S等位基因频率(61.8% vs.47.5%)均高于无自杀行为患者(P<0.05);抑郁自杀组性别分层比较未显示显著性差异(P>0.05);抑郁自杀组病情程度分层比较,重度抑郁自杀者SS基因型频率(42.5% vs.18.2%)及S等位基因频率(68.7% vs.36.4%)均高于中度抑郁自杀者(P<0.05)。结论在中国汉族人群中,5-HTTLPR多态性和抑郁症相关。S等位基因可能是抑郁症的易感基因,特别是女性,SS型可能是抑郁症易感基因型;S等位基因可能是抑郁症患者自杀的危险基因,SS基因型人群可能是抑郁症患者自杀的危险人群,特别是携带S等位基因的重度抑郁症患者更易自杀。     

RESEARCH OF GENETIC POLYMORPHISM OF 5-HTT IN CHILDHOOD AUTISM

Objective To reveal the relationship between the 5-HTTLPR and the Chinese Han nationality children with CA, compared the distribution of the 5-HTTLPR between the Han Chinese children with CA and healthy Han Chinese children , and analyzed the association between the 5-HTTLPR and clinical symptoms of the Han Chinese children with CA. Methods Genomic DNAs of fifty subjects including 25 autistic children and 25 controls were extracted from blood samples. PCR amplification using Oligonucleotide primers flanking 5-HTTLPR was performed. Results① Three kinds of alleles including the S （short） allele, the L （long） allele and the VL allele were found , and the 5-HTTLPR genotypes shown were S/S, L/L, S/L and L/VL. ②Allele frequencies did not differ significantly in patient groups in comparison with the control sample. No significant difference was identified between the observed 5-HTTLPR genotype distribution of the patient groups and control group. ③The distribution of homozygons and heterozygous subjects between the two groups differed significantly. ④ The genotypes of the 5-HTTLPR polymorphism correlated significantly with the Body Movement Factor. ⑤ The allele frequency of healthy Han Chinese population and that of healthy Japanese population were similar. The frequency of S allele in not only autistic subjects but also healthy children in this study was considerably more than that in Caucasians and the frequency of L allele in our subjects decreased correspondingly. Conclusion ① A significant difference in the allele frequency between the Han Chinese and Caucasian populations was found. ② The genotypes of the 5-HTTLPR polymorphism correlated significantly with the Body Movement Factor of the patients. ③ The homozygote and the L allele were positively relevant to CA and they might be the risk factors of CA. The heterozygote and the S allele were negatively relevant to CA and they might be the protective factors of CA.     

ASSOCIATION ANALYSIS OF POLYMORPHISMS IN SIX GENES WITHIN THE GH/IGF-1 AXIS IN PATIENTS WITH IDIOPATHIC SHORT STATURE IN THE CHINESE HAN POPULATION

Objective To investigate relationships of polymorphisms in six genes ( GHR,IGF-1,IGF-1R,IGFBP-3,JAK2,and STAT5b) in the growth hormone ( GH)/insulin-like growth factor-1 (IGF-1) axis with idiopathic short stature (ISS) in the Chinese Han population. Methods A casecontrol study was carried out on a cohort of 198 ISS patients and 306 healthy controls.A total of 106 tagging single nucleotide polymorphisms (tagSNPs) from the six genes were selected from the HapMap ( haplotype map of the human genome ) Han Chinese in the Beijing subset.Results of genotyping conducted by highthroughput Illumina GoldenGateTM Assay were analyzed by statistical software. Results Both individual tagSNPs and haplotypes showed an association with ISS in the Hun Chinese population ( P ＜ 0.05 ).For each single test,both allele and genotype were tested.By allele frequency analysis,six positive SNP sites ( rsNo.1,rsNo.2,rsNo.3,rsNo.4,rsNo.5,and rsNo.6 ) of 3 genes ( JAK2,IGF-1R,and GHR) were found having associations with ISS. By genotype frequency analysis, there were significant differences between the patient and control groups in the following SNP sites:4 sites in JAK2 gene ( rsNo.1,rsNo.2,rsNo.3,and rsNo.4 ) and 1 site in GHR gene ( rsNo.6 ).The risk which affected ISS was found related to the JAK2 gene in 4 sites ( increase in rsNo.1 and decrease in rsNo.2,rsNo.3,and rsNo.4) and to the GHR gene in 1 site (decrease in rsNo.6).They were four haplotypes in gene of IGF-1R as “ TGC","CGCT",”TA",and "CA",one haplotype in IGFBP-3 as "TA",and one haplotype in JAK2 as "CTG",which revealed high significance for risks of affecting ISS. At last,multivariate logistic regression analysis of specific site rsNo.6 of the GHR gene revealed that the serum IGF-1 was related to genotypes AA and AC,with genotype CC as the reference ( P =0.015). Conclusion Genetic variances in six genes within the GH/IGF-1 axis may be important etiological factors for ISS in the Chinese Han population.     

先天性巨结肠与RET基因c135位点单核苷酸多态性相关性分析

目的确定国人陕西地区正常汉族人群中是否存在RET基因c135位点单核苷酸多态性及基因频率,研究先天性巨结肠患儿该位点基因型与表型的相关性,探讨其病因。方法整体抽样随机选取40例陕西西安地区健康汉族献血者血样进行DNA抽提。对16例病理诊断证实为先天性巨结肠患儿狭窄段肠组织标本进行DNA提取(均为陕西地区患儿,汉族,散发性)。PCR扩增RET基因外显子2(含c135片段),长度300 bp,产物纯化后直接测序,并用相关软件及统计学分析。结果陕西地区正常汉族人群存在RET基因c135位点单核苷酸多态性A/G,A、G基因频率分别为0.475、0.525,各等位基因频率接近,G等位基因频率稍占优势。病例组16例A、G基因频率分别为0.844,0.156。病例组基因型以突变型AA(13/16)为主。对照组与病例组存在明显差异(P<0.001)。A等位基因与疾病关联强度OR=5.97,OR95%CI(2.24,15.92),OR值在0.05水平上有显著性。结论国人陕西地区汉族人群RET位点存在单核苷酸多态性A/G,c135G>A。先天性巨结肠表型与该位点A基因型明显相关。RET基因c135位点单核苷酸多态性纯合突变型AA在先天性巨结肠患儿中过高表达。     

新疆哈萨克族群体三个STR位点遗传多态性

目的　了解新疆哈萨克族人群D1 6S5 39,D7S82 0 ,D1 3S31 7三个STR位点的遗传多态性 ,建立该民族群体遗传学数据库。方法　运用复合PCR扩增 ,6 %变性聚丙烯酰胺凝胶电泳结合银染技术对 1 0 2位无关个体及 8个家系 42人的哈萨克族人群进行调查 ,并与其他种族或人群进行比较。结果　三个位点分别检测出 8、7、8个等位片段 ,多态性分布符合Hardy Weinberg平衡定律。期望杂合度为 0 .9439、0 .935 6、0 .930 4。三个位点的累积PIC =0 .990 5、DP =0 .9998、PE =0 .95 72。此外 ,在与其他四个人群比较中发现除与北京汉族在D7S82 0位点上无统计学意义 (P >0 .0 5 ) ,其余均可见显著性差异 (P <0 .0 5 )。同时 ,在家系调查中无一突变发现且均按孟德尔遗传规律传递。结论　三个STR位点的联合分析在法医学应用及群体遗传学中具有较高的价值。     

PATERNITY IDENTIFICATION ON ABORTED FETAL MATERIAL

ＰＡＴＥＲＮＩＴＹＩＤＥＮＴＩＦＩＣＡＴＩＯＮＯＮＡＢＯＲＴＥＤＦＥＴＡＬＭＡＴＥＲＩＡＬＬｉＳｈｅｎｇｂｉｎ；ＬｉＸｉａｏｍｉｎｇ；（ＤｅｐａｒｔｍｅａｔｏｆＦｏｒｅｎｓｉｃＭｅｄｉｃｉｎｅ，Ｘｉ＇ａｎＭｅｄｉｃａｌＵｎｉｖｅｒｓｉｔｙ，Ｘｉ＇ａｎ...     

云南白族STR遗传多态性研究

目的　研究我国白族STR遗传多态性。方法　通过STR复合扩增、基因扫描、基因分型调查了 98名中国白族无关个体 1 5个STR基因座等位基因分布情况。结果　共检出 1 3 4个STR等位基因 ,其频率分布在 0 .0 0 5 8～ 0 .5 799之间 ,杂合度 (H)为 0 .5 83 4～ 0 .882 8,个体识别力 (DP)为 0 .773 9～ 0 .9666,非父排除率 (EPP)为 0 .5 692～ 0 .8694,多态信息量 (PIC)为 0 .5 3 1 7～ 0 .8694。结论　为进一步研究中华民族STR遗传结构奠定了基础 ,在人类学、法医学等领域也有重要的应用价值     

MITOCHONDRIAL DNA POLYMORPHISM IN CONTROL REGION FROM CHINESE YUGU POPULATION

Objective To investigate the mitochondrial DNA sequence polymorphism sites in Chinese YUGU ethnic group and to provide basic data used in forensic purpose. Methods Genomic DNA was extracted from the hole blood of 100 unrelated individuals of Chinese YUGU ethnic group by standard chelex-100 method. The sequence polymorphism sites was determined by PCR amplification and direct sequencing. Results 54 polymorphic sites were noted in mtDNA np16091-16418 region, and 46 haplotypes were identified. The genetic diversity was calculated to be 0. 9691, and the genetic identity was calculated to be 0. 0406. Conclusion There are some particular polymorphism sites in Chinese YUGU ethnic group. The results suggest that sequence polymorphism from np]6091 -- 16418 in human mitochondrial DNA can be used as a biological marker for forensic identity.     

ANALYSIS ON GENETIC POLYMORPHISM OF 6 STR LOCI ON CHROMOSOME 12 IN CHINESE HAN POPULATION

Shorttandemrepeats(STRs)arearichsource ofhighlypolymorphicmarkersinthehumange nome,arerelativelysmallinsize,andcanbestud iedwiththerelativeexpediently.ThustheSTR polymorphismsarehighlyusefultoolsforlinkagea nalysisofdisease relatedgenesandconstructionthe …     

GENETIC POLYMORPHISM OF STR LOCI IN CHINESE DRUNGS

ＳＴＲｉｓａｕｎｉｖｅｒｓａｌｇｅｎｅｔｉｃｍａｒｋｅｒｔｈａｔｈａｓｃｈａｎｇｅａｂｌｅ ｐｏｌｙｍｏｒｐｈｉｓｍａｎｄｓｔａｂｌｅｈｅｒｅｄｉｔｙｉｎｈｕｍａｎ ｇｅｎｏｍｅ .ＩｔｉｓａｓｐｅｃｉｆｉｃＤＮＡｓｅｇｍｅｎｔｃｏｍｐｏｓｅｄｏｆ 2～ 7ｂａｓｅｐａｉｒｓａｓｉｔｓｃｏｒｅｓｅｑｕｅｎｃｅ ,ａｎｄｉｓｆｏｒｍｅｄｔｈｒｏｕｇｈｔｈｅｒｅｐｅａｔｅｄｃｏｎｎｅｃｔｉｏｎｏｆｔｈｅｓａｍｅｏｎｅ[1,2 ] .Ｓｉｎｃｅｉｔｈａｓｔｈｅｃｈａｒａｃｔｅｒｉｓｔｉｃｓｓｕｃｈａｓｎｕｍｅｒｏｕｓａ…     

西藏珞巴族15个STR位点遗传多态性研究

目的选择具有高度遗传多态性与稳定性的15个STR位点,进行西藏珞巴族、拉萨藏族、昌都藏族与亚洲其他人群的遗传关系分析。方法收集西藏珞巴族、拉萨和昌都藏族无关个体血样,利用AmpF/STR Identifiler试剂对样本DNA进行多重PCR扩增,产物在ABI 3100遗传分析仪上进行毛细管电泳和基因扫描及分型,并结合文献资料与中国其他21个民族群体、亚洲6个人群进行比较,绘制遗传树,分析西藏各民族与其他亚洲人群间的遗传关系。结果八个汉族群体首先聚类,广西五个民族首先聚类,两者共同与西藏珞巴族、拉萨藏族和昌都藏族聚类后,再与中华其他民族聚类,最后与亚洲6个人群及中国维吾尔族聚类。结论研究结果与各人群地理分布和历史基本一致,为研究珞巴族和藏族的起源、迁移、形成和发展提供遗传学依据。