The Demise of a Tropical Coastal Lagoon as Breeding Habitat for Ground-Nesting Waterbirds: Unintended,but Anticipated Consequences of Development

Laguna Cuyutlán (Colima, Mexico), an Important Bird Area, used to provide breeding habitat for ground-nesting waterbirds. During 2014 and 2015, nesting efforts of laughing gull, black skimmer, and royal, gull-billed and Forster's terns failed almost completely due to inundation, while least terns and snowy plovers fared the same during 2014. No anomalies in rainfall, tidal level, or coseismic subsidence explained such failure. Rather, the inundations were due to the enlarging of Canal Tepalcates that connects the lagoon with the sea, which was widened from 100 to 300 m and dredged to 17-m deep. Before this, the hydrodynamics were regulated by evaporation and runoff. Now, increased seawater volumes dominate the basin's hydrodynamics. The failure of Laguna Cuyutlán as a breeding habitat for these birds is an important threat for these species, as this lagoon held one of the < 20 colonies known for several of these species along the western coast of North and Central America. Documenting this demise of Laguna Cuyutlán for ground-nesting waterbirds transcends the regional scale as it emphasizes the little consideration still given to biodiversity vs. economic development, and is a warning for coastal projects in other developing areas of the world.     

On the numerical accuracy of the prediction of resistance coefficients in ship stern flow calculations

This article presents a study on the accuracy of the numerical determination of the friction and pressure resistance coefficients of ship hulls. The investigation was carried out for the KVLCC2 tanker at model- and full-scale Reynolds numbers. Gravity waves were neglected, i.e., we adopted the so-called double-model flow. Single-block grids with H–O topology were adopted for all the calculations. Three eddy viscosity models were employed: the one-equation eddy viscosity and the two-equation models proposed by Menter and the TNT version of the two-equation k-ω model. Verification exercises were performed in sets of nearly geometrically similar grids with different densities in the streamwise, normal, and girthwise directions. The friction and pressure resistance coefficients were calculated for different levels of the iterative error and for computational domains of different size. The results show that on the level of grid refinement used, it is possible to calculate the viscous resistance coefficients in H–O grids that do not match the ship contour with a numerical uncertainty of less than 1%. The differences between the predictions of different turbulence models were larger than the numerical uncertainty; however, these differences tended to decrease with increases in the Reynolds number. The pressure resistance was remarkably sensitive to domain size and far-field boundary conditions. Either a large domain or the application of a viscous–inviscid interaction procedure is needed for reliable results. This work was presented in part at the International Conference on Computational Methods in Marine Engineering—MARINE 2007, Barcelona, June 3–4, 2007.     

Physical–biological coupling in spore dispersal of kelp forest macroalgae

The physical–biological linkages controlling the dispersal of spores produced by macroalgae that reside in kelp forests are complicated and laced with feedbacks. Here we discuss the fundamental elements of these interactions. Biological considerations include spore swimming and sinking speeds, their periods of viability in the plankton, and the height of spore release above the seafloor, which together determine the durations over which spores can be swept by horizontal currents before they contact the seafloor. Morphologies and material properties of canopy forming kelps may also influence the drag exerted on passing waters by the kelps, the plants' ability to persist in the face of rapid flows, and thereby the degree to which impinging currents are redirected around, or slowed within, kelp forests. Macroalgal life histories, and the size of spore sources as controlled by the dimensions of kelp forests and the density and fecundity of individuals within them, influence effective dispersal distances as well. Physical considerations encompass the mean speed, direction, and timescales of variability of currents relative to spore suspension times, the interaction of surface gravity waves with currents in producing turbulence in the benthic boundary layer, wind-driven surface mixing, water stratification, and shoreline bathymetry and substratum roughness, all of which can affect the interplay of vertical and horizontal transport of macroalgal spores. Intricate within-forest processes may induce attenuation of current speeds and consequent reductions in seabed shear, along with simultaneous production of small-scale turbulence in kelp wakes. Slower mean currents and smaller eddy scales in turn may attenuate vertical mixing within forests, thus extending spore suspension times. Further complexities likely arise due to changes in the relative rates of horizontal and vertical dispersion, modifications to the overall profiles of vertical mixing, and the creation of fine-scale secondary flows around kelp individuals and substratum features. Under conditions of more rapid currents, submergence of the surface canopy and the establishment of skimming flows at the canopy–fluid interface may introduce additional coherent flow structures that alter rates of fluid exchange to and from the forest. Many of these coupled physical–biological processes are just beginning to be examined in a rigorous fashion in kelp forests, but their potential importance is clear.     

On the dense water spreading off the Ross Sea shelf (Southern Ocean)

In this study, current meter and hydrological data obtained during the X Italian Expedition in the Ross Sea (CLIMA Project) are analyzed. Our data show a nice agreement with previous data referring to the water masses present in this area and their dynamics. Here, they are used to further analyze the mixing and deepening processes of Deep Ice Shelf Water (DISW) over the northern shelf break of the Ross Sea. In more detail, our work is focused on the elementary mechanisms that are the most efficient in removing dense water from the shelf: either classical mixing effects or density currents that interact with some topographic irregularity in order to drop to deeper levels, or also the variability of the Antarctic Circumpolar Current (ACC) which, in its meandering, can push the dense water off the shelf, thus interrupting its geostrophic flow. We also discuss in detail the (partial) evidence of dramatic interactions of the dense water with bottom particulate, of geological or biological origin, thus generating impulsive or quasi-steady density-turbidity currents. This complex interaction allows one to consider bottom particular and dense water as a unique self-interacting system. In synthesis, this is a first tentative analysis of the effect of bottom particulate on the dense water dynamics in the Ross Sea.     

Advances in port studies: the contribution of 40 years Maritime Policy & Management

Port economics, management and policy have progressively emerged as a distinctive research field, and a core part of maritime economics. This paper provides an analysis of all the 267 port studies published in Maritime Policy & Management (MPM) since its inception in 1973. This paper provides a content analysis for seven interrelated research theme categories including main research topics and methods, authorship distribution and citation counts. It is demonstrated that MPM played, and continues to play, a key role in publishing research on seaports. The published research increasingly applies established analytical frameworks to ports. The paper concludes with a discussion on current challenges for port-related research.     

An algorithm for oceanic front detection in chlorophyll and SST satellite imagery

An algorithm is described for oceanic front detection in chlorophyll (Chl) and sea surface temperature (SST) satellite imagery. The algorithm is based on a gradient approach: the main novelty is a shape-preserving, scale-sensitive, contextual median filter applied selectively and iteratively until convergence. This filter has been developed specifically for Chl since these fields have spatial patterns such as chlorophyll enhancement at thermohaline fronts and small- and meso-scale chlorophyll blooms that are not present in SST fields. Linear Chl enhancements and localized (point-wise) blooms are modeled as ridges and peaks respectively, whereas conventional fronts in Chl and SST fields are modeled as steps or ramps. Examples are presented of the algorithm performance using modeled (synthetic) images as well as synoptic Chl and SST imagery. After testing, the algorithm was used on > 6000 synoptic images, 1999–2007, to produce climatologies of Chl and SST fronts off the U.S. Northeast.     

1/32° real-time global ocean prediction and value-added over 1/16° resolution

A 1/32° global ocean nowcast/forecast system has been developed by the Naval Research Laboratory at the Stennis Space Center. It started running at the Naval Oceanographic Office in near real-time on 1 Nov. 2003 and has been running daily in real-time since 1 Mar. 2005. It became an operational system on 6 March 2006, replacing the existing 1/16° system which ceased operation on 12 March 2006. Both systems use the NRL Layered Ocean Model (NLOM) with assimilation of sea surface height from satellite altimeters and sea surface temperature from multi-channel satellite infrared radiometers. Real-time and archived results are available online at http://www.ocean.nrlssc.navy.mil/global_nlom. The 1/32° system has improvements over the earlier system that can be grouped into two categories: (1) better resolution and representation of dynamical processes and (2) design modifications. The design modifications are the result of accrued knowledge since the development of the earlier 1/16° system. The improved horizontal resolution of the 1/32° system has significant dynamical benefits which increase the ability of the model to accurately nowcast and skillfully forecast. At the finer resolution, current pathways and their transports become more accurate, the sea surface height (SSH) variability increases and becomes more realistic and even the global ocean circulation experiences some changes (including inter-basin exchange). These improvements make the 1/32° system a better dynamical interpolator of assimilated satellite altimeter track data, using a one-day model forecast as the first guess. The result is quantitatively more accurate nowcasts, as is illustrated by several model-data comparisons. Based on comparisons with ocean color imagery in the northwestern Arabian Sea and the Gulf of Oman, the 1/32° system has even demonstrated the ability to map small eddies, 25–75 km in diameter, with 70% reliability and a median eddy center location error of 22.5 km, a surprising and unanticipated result from assimilation of altimeter track data. For all of the eddies (50% small eddies), the reliability was 80% and the median eddy center location error was 29 km. The 1/32° system also exhibits improved forecast skill in relation to the 1/16° system. This is due to (a) a more accurate initial condition for the forecast and (b) better resolution and representation of critical dynamical processes (such as upper ocean – topographic coupling via mesoscale flow instabilities) which allow the model to more accurately evolve these features in time while running in forecast mode (forecast atmospheric forcing for the first 5 days, then gradually reverting toward climatology for the remainder of the 30-day forecast period). At 1/32° resolution, forecast SSH generally compares better with unassimilated observations and the anomaly correlation of the forecast SSH exceeds that from persistence by a larger amount than found in the 1/16° system.     

An approach to estimation of near-surface turbulence and CO2 transfer velocity from remote sensing data

The air–sea CO₂ exchange is primarily determined by the boundary-layer processes in the near-surface layer of the ocean since it is a water-side limited gas. As a consequence, the interfacial component of the CO₂ transfer velocity can be linked to parameters of turbulence in the near-surface layer of the ocean. The development of remote sensing techniques provides a possibility to quantify the dissipation of the turbulent kinetic energy in the near-surface layer of the ocean and the air–sea CO₂ transfer velocity on a global scale. In this work, the dissipation rate of the turbulent kinetic energy in the near-surface layer of the ocean and its patchiness has been linked to the air–sea CO₂ transfer velocity with a boundary-layer type model. Field observations of upper ocean turbulence, laboratory studies, and the direct CO₂ flux measurements are used to validate the model. The model is then forced with the TOPEX POSEIDON wind speed and significant wave height to demonstrate its applicability for estimating the distribution of the near-surface turbulence dissipation rate and gas transfer velocity for an extended (decadal) time period. A future version of this remote sensing algorithm will incorporate directional wind/wave data being available from QUIKSCAT, a now-cast wave model, and satellite heat fluxes. The inclusion of microwave imagery from the Special Sensor Microwave Imager (SSM/I) and the Synthetic Aperture Radar (SAR) will provide additional information on the fractional whitecap coverage and sea surface turbulence patchiness.     

Carbonate chemistry dynamics and carbon dioxide fluxes across the atmosphere–ice–water interfaces in the Arctic Ocean: Pacific sector of the Arctic

Climatic changes in the Northern Hemisphere have led to remarkable environmental changes in the Arctic Ocean, which is surrounded by permafrost. These changes include significant shrinking of sea-ice cover in summer, increased time between sea-ice break-up and freeze-up, and Arctic surface water freshening and warming associated with melting sea-ice, thawing permafrost, and increased runoff. These changes are commonly attributed to the greenhouse effect resulting from increased atmospheric carbon dioxide (CO₂) concentration and other non-CO₂ radiatively active gases (methane, nitrous oxide). The greenhouse effect should be most pronounced in the Arctic where the largest air CO₂ concentrations and winter–summer variations in the world for a clean background environment were detected. However, the air–land–shelf interaction in the Arctic has a substantial impact on the composition of the overlying atmosphere; as the permafrost thaws, a significant amount of old terrestrial carbon becomes available for biogeochemical cycling and oxidation to CO₂. The Arctic Ocean's role in determining regional CO₂ balance has been ignored, because of its small size (only  4% of the world ocean area) and because its continuous sea-ice cover is considered to impede gaseous exchange with the atmosphere so efficiently that no global climate models include CO₂ exchange over sea-ice. In this paper we show that: (1) the Arctic shelf seas (the Laptev and East-Siberian seas) may become a strong source of atmospheric CO₂ because of oxidation of bio-available eroded terrestrial carbon and river transport; (2) the Chukchi Sea shelf exhibits the strong uptake of atmospheric CO₂; (3) the sea-ice melt ponds and open brine channels form an important spring/summer air CO₂ sink that also must be included in any Arctic regional CO₂ budget. Both the direction and amount of CO₂ transfer between air and sea during open water season may be different from transfer during freezing and thawing, or during winter when CO₂ accumulates beneath Arctic sea-ice; (4) direct measurements beneath the sea ice gave two initial results. First, a drastic pCO₂ decrease from 410 μatm to 288 μatm, which was recorded in February–March beneath the fast ice near Barrow using the SAMI-CO₂ sensor, may reflect increased photosynthetic activity beneath sea-ice just after polar sunrise. Second, new measurements made in summer 2005 beneath the sea ice in the Central Basin show relatively high values of pCO₂ ranging between 425 μatm and 475 μatm, values, which are larger than the mean atmospheric value in the Arctic in summertime. The sources of those high values are supposed to be: high rates of bacterial respiration, import of the Upper Halocline Water (UHW) from the Chukchi Sea (CS) where values of pCO₂ range between 400 and 600 μatm, a contribution from the Lena river plume, or any combination of these sources.     

A high order linear model for the prediction of internal lee waves at the main sill of the Strait of Gibraltar

A linear theory for the physical fields in the water column under the action of large amplitude internal lee waves at the main sill of the Strait of Gibraltar is developed. The procedure is a combination of the perturbation and normal modes methods in order to study steady resonant conditions. The lowest order linear approach of the methodology resumes the Taylor–Goldstein equation, which can reconstruct the main features of the observed fields but the high order approach gives the finest structure and sometimes the largest contributions. The role of the non-linear terms is investigated up to the second order taking into account the non-linear interactions between modes, leading to an effective reconstruction of the whole water column for the velocity field.